Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhac2Q91Y09 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhac2Q91Y09 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 Mir449b-201ENSMUST00000104833 80 ntBASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhac2Q91Y09 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.77■□□□□ 0.27
Pcdhac2Q91Y09 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.77■□□□□ 0.27
Pcdhac2Q91Y09 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.77■□□□□ 0.27
Pcdhac2Q91Y09 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.77■□□□□ 0.27
Pcdhac2Q91Y09 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhac2Q91Y09 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhac2Q91Y09 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhac2Q91Y09 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhac2Q91Y09 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Gm22175-201ENSMUST00000175007 78 ntBASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhac2Q91Y09 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhac2Q91Y09 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms