Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga11Q91XY8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Gm27742-201ENSMUST00000184667 60 ntBASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Gm18669-201ENSMUST00000216049 778 ntBASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga11Q91XY8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga11Q91XY8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Mir3081-201ENSMUST00000175305 84 ntBASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhga11Q91XY8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Gm44454-201ENSMUST00000198541 138 ntBASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga11Q91XY8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms