Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Gm7461-201ENSMUST00000058918 827 ntBASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Pcdhga4Q91XY4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Gm6376-201ENSMUST00000209407 580 ntBASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Gm8655-201ENSMUST00000221159 852 ntBASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhga4Q91XY4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga4Q91XY4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga4Q91XY4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Pcdhga4Q91XY4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga4Q91XY4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhga4Q91XY4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga4Q91XY4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga4Q91XY4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga4Q91XY4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga4Q91XY4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga4Q91XY4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga4Q91XY4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga4Q91XY4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga4Q91XY4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms