Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Gm14701-201ENSMUST00000117156 348 ntBASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Gm14057-201ENSMUST00000120631 482 ntBASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgc5Q91XW9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhgc5Q91XW9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgc5Q91XW9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgc5Q91XW9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgc5Q91XW9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgc5Q91XW9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgc5Q91XW9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Gm45167-201ENSMUST00000208007 322 ntBASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgc5Q91XW9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgc5Q91XW9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgc5Q91XW9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgc5Q91XW9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgc5Q91XW9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms