Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Gm9522-201ENSMUST00000182394 926 ntBASIC18.28■□□□□ 0.52
StrcQ8VIM6 Gm8602-201ENSMUST00000184045 607 ntBASIC18.28■□□□□ 0.52
StrcQ8VIM6 Gm28631-201ENSMUST00000190740 334 ntBASIC18.28■□□□□ 0.52
StrcQ8VIM6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Gm15653-201ENSMUST00000119247 907 ntBASIC18.27■□□□□ 0.52
StrcQ8VIM6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
StrcQ8VIM6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.27■□□□□ 0.51
StrcQ8VIM6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
StrcQ8VIM6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
StrcQ8VIM6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.26■□□□□ 0.51
StrcQ8VIM6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.26■□□□□ 0.51
StrcQ8VIM6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.26■□□□□ 0.51
StrcQ8VIM6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.26■□□□□ 0.51
StrcQ8VIM6 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.26■□□□□ 0.51
StrcQ8VIM6 Gm20445-201ENSMUST00000061905 565 ntBASIC18.26■□□□□ 0.51
StrcQ8VIM6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
StrcQ8VIM6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
StrcQ8VIM6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.25■□□□□ 0.51
StrcQ8VIM6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.25■□□□□ 0.51
StrcQ8VIM6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Gm16476-201ENSMUST00000221544 139 ntBASIC18.25■□□□□ 0.51
StrcQ8VIM6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
StrcQ8VIM6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
StrcQ8VIM6 Rarb-207ENSMUST00000225921 2756 ntBASIC18.24■□□□□ 0.51
StrcQ8VIM6 Mir1897-201ENSMUST00000122581 272 ntBASIC18.24■□□□□ 0.51
StrcQ8VIM6 AY702102-202ENSMUST00000194651 1173 ntBASIC18.24■□□□□ 0.51
StrcQ8VIM6 Gm6266-201ENSMUST00000203844 806 ntBASIC18.24■□□□□ 0.51
StrcQ8VIM6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
StrcQ8VIM6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
StrcQ8VIM6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.24■□□□□ 0.51
StrcQ8VIM6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
StrcQ8VIM6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
StrcQ8VIM6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
StrcQ8VIM6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
StrcQ8VIM6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
StrcQ8VIM6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.24■□□□□ 0.51
StrcQ8VIM6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
StrcQ8VIM6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
StrcQ8VIM6 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.23■□□□□ 0.51
StrcQ8VIM6 Gm2451-201ENSMUST00000199447 999 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms