Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H1fooQ8VIK3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H1fooQ8VIK3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
H1fooQ8VIK3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H1fooQ8VIK3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H1fooQ8VIK3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Asic1-205ENSMUST00000228185 1818 ntBASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H1fooQ8VIK3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Gm14859-201ENSMUST00000117752 357 ntBASIC13.02□□□□□ -0.33
H1fooQ8VIK3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H1fooQ8VIK3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm8825-201ENSMUST00000182565 998 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm4518-201ENSMUST00000182638 718 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm9172-201ENSMUST00000212092 954 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H1fooQ8VIK3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Gm29340-201ENSMUST00000188763 3854 ntBASIC13□□□□□ -0.33
H1fooQ8VIK3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H1fooQ8VIK3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms