Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Odf4Q8VI88 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Odf4Q8VI88 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.93□□□□□ -0.18
Odf4Q8VI88 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.93□□□□□ -0.18
Odf4Q8VI88 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Mir8098-201ENSMUST00000184011 137 ntBASIC13.93□□□□□ -0.18
Odf4Q8VI88 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Odf4Q8VI88 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.92□□□□□ -0.18
Odf4Q8VI88 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Odf4Q8VI88 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.92□□□□□ -0.18
Odf4Q8VI88 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.92□□□□□ -0.18
Odf4Q8VI88 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Gm27459-201ENSMUST00000184860 107 ntBASIC13.91□□□□□ -0.18
Odf4Q8VI88 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Odf4Q8VI88 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.91□□□□□ -0.18
Odf4Q8VI88 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.91□□□□□ -0.18
Odf4Q8VI88 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms