Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm18489-201ENSMUST00000172565 551 ntBASIC15.17■□□□□ 0.02
Cdhr1Q8VHP6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdhr1Q8VHP6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cdhr1Q8VHP6 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.17■□□□□ 0.02
Cdhr1Q8VHP6 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.17■□□□□ 0.02
Cdhr1Q8VHP6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr1Q8VHP6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.17■□□□□ 0.02
Cdhr1Q8VHP6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr1Q8VHP6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cdhr1Q8VHP6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdhr1Q8VHP6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr1Q8VHP6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr1Q8VHP6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr1Q8VHP6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr1Q8VHP6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cdhr1Q8VHP6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdhr1Q8VHP6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdhr1Q8VHP6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdhr1Q8VHP6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdhr1Q8VHP6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms