Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rnf8Q8VC56 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15□□□□□ -0.01
Rnf8Q8VC56 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15□□□□□ -0.01
Rnf8Q8VC56 Gm36967-201ENSMUST00000193814 266 ntBASIC15□□□□□ -0.01
Rnf8Q8VC56 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15□□□□□ -0.01
Rnf8Q8VC56 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf8Q8VC56 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.99□□□□□ -0.01
Rnf8Q8VC56 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Gm15794-201ENSMUST00000120182 631 ntBASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Gm17807-201ENSMUST00000186869 298 ntBASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rnf8Q8VC56 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Gm18669-201ENSMUST00000216049 778 ntBASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rnf8Q8VC56 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf8Q8VC56 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms