Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.03■□□□□ 0.32
Rpap2Q8VC34 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Mir8098-201ENSMUST00000184011 137 ntBASIC17.03■□□□□ 0.32
Rpap2Q8VC34 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Gm5864-201ENSMUST00000202263 970 ntBASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rpap2Q8VC34 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpap2Q8VC34 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpap2Q8VC34 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpap2Q8VC34 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpap2Q8VC34 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rpap2Q8VC34 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpap2Q8VC34 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.02■□□□□ 0.32
Rpap2Q8VC34 Gm11452-201ENSMUST00000122376 690 ntBASIC17.02■□□□□ 0.32
Rpap2Q8VC34 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.02■□□□□ 0.32
Rpap2Q8VC34 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.02■□□□□ 0.32
Rpap2Q8VC34 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rpap2Q8VC34 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.02■□□□□ 0.31
Rpap2Q8VC34 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpap2Q8VC34 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpap2Q8VC34 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
Rpap2Q8VC34 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Gm28659-201ENSMUST00000188013 759 ntBASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Rpap2Q8VC34 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpap2Q8VC34 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpap2Q8VC34 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpap2Q8VC34 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpap2Q8VC34 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpap2Q8VC34 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rpap2Q8VC34 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17■□□□□ 0.31
Rpap2Q8VC34 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17■□□□□ 0.31
Rpap2Q8VC34 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpap2Q8VC34 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpap2Q8VC34 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpap2Q8VC34 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpap2Q8VC34 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rpap2Q8VC34 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpap2Q8VC34 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Gm7230-201ENSMUST00000173026 815 ntBASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpap2Q8VC34 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms