Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Olfr129-201ENSMUST00000122318 993 ntBASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Vps39Q8R5L3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps39Q8R5L3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps39Q8R5L3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms