Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Gm23760-201ENSMUST00000158350 116 ntBASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Gm10925-201ENSMUST00000189941 678 ntBASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Gm37241-201ENSMUST00000191736 523 ntBASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 AC132104.1-201ENSMUST00000213615 260 ntBASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Gm44562-201ENSMUST00000207194 1347 ntBASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacnb1Q8R3Z5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Gm29664-201ENSMUST00000191125 463 ntBASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacnb1Q8R3Z5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Gm25116-201ENSMUST00000157191 122 ntBASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Gm27867-201ENSMUST00000184778 125 ntBASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Gm43952-201ENSMUST00000203765 751 ntBASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 CT025525.1-201ENSMUST00000226325 1054 ntBASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacnb1Q8R3Z5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cacnb1Q8R3Z5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacnb1Q8R3Z5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cacnb1Q8R3Z5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacnb1Q8R3Z5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacnb1Q8R3Z5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacnb1Q8R3Z5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms