Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slf1Q8R3P9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slf1Q8R3P9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slf1Q8R3P9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slf1Q8R3P9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.74■□□□□ 0.11
Slf1Q8R3P9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Slf1Q8R3P9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Gm13559-201ENSMUST00000120476 863 ntBASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Gm16061-201ENSMUST00000122167 857 ntBASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slf1Q8R3P9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Gm13474-201ENSMUST00000122466 815 ntBASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Gm10252-201ENSMUST00000209541 832 ntBASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slf1Q8R3P9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slf1Q8R3P9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Slf1Q8R3P9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slf1Q8R3P9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slf1Q8R3P9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slf1Q8R3P9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Slf1Q8R3P9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Gm13186-201ENSMUST00000118031 316 ntBASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.7■□□□□ 0.1
Slf1Q8R3P9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms