Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Gm9385-201ENSMUST00000117563 472 ntBASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Gm43474-201ENSMUST00000196415 774 ntBASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.78■□□□□ 0.76
Chmp7Q8R1T1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp7Q8R1T1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp7Q8R1T1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.75
Chmp7Q8R1T1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp7Q8R1T1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp7Q8R1T1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp7Q8R1T1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 AA543401-201ENSMUST00000164248 1269 ntBASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp7Q8R1T1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.75■□□□□ 0.75
Chmp7Q8R1T1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms