Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Gm25016-201ENSMUST00000158399 131 ntBASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afjQ8R1M2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afjQ8R1M2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.46□□□□□ -0.1
H2afjQ8R1M2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afjQ8R1M2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afjQ8R1M2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
H2afjQ8R1M2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afjQ8R1M2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.46□□□□□ -0.1
H2afjQ8R1M2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 BC037039-201ENSMUST00000192003 2205 ntBASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afjQ8R1M2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afjQ8R1M2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afjQ8R1M2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afjQ8R1M2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afjQ8R1M2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
H2afjQ8R1M2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afjQ8R1M2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afjQ8R1M2 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.43□□□□□ -0.1
H2afjQ8R1M2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.43□□□□□ -0.1
H2afjQ8R1M2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.43□□□□□ -0.1
H2afjQ8R1M2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms