Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Gm15165-201ENSMUST00000118140 502 ntBASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Gm14722-201ENSMUST00000118943 689 ntBASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cchcr1Q8K2I2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Gm27704-201ENSMUST00000185094 107 ntBASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cchcr1Q8K2I2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Gm19164-201ENSMUST00000210667 640 ntBASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cchcr1Q8K2I2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Sybu-209ENSMUST00000228639 4113 ntBASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.35■□□□□ 0.53
Cchcr1Q8K2I2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.34■□□□□ 0.53
Cchcr1Q8K2I2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms