Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trim68Q8K243 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.83■□□□□ 0.28
Trim68Q8K243 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim68Q8K243 Gm25406-201ENSMUST00000157599 105 ntBASIC16.83■□□□□ 0.28
Trim68Q8K243 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim68Q8K243 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim68Q8K243 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trim68Q8K243 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trim68Q8K243 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.83■□□□□ 0.28
Trim68Q8K243 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.83■□□□□ 0.28
Trim68Q8K243 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.83■□□□□ 0.28
Trim68Q8K243 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim68Q8K243 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim68Q8K243 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim68Q8K243 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim68Q8K243 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim68Q8K243 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trim68Q8K243 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trim68Q8K243 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim68Q8K243 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim68Q8K243 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trim68Q8K243 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim68Q8K243 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim68Q8K243 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim68Q8K243 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim68Q8K243 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trim68Q8K243 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim68Q8K243 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim68Q8K243 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim68Q8K243 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trim68Q8K243 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trim68Q8K243 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trim68Q8K243 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim68Q8K243 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Trim68Q8K243 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim68Q8K243 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Gm27646-201ENSMUST00000183989 110 ntBASIC16.81■□□□□ 0.28
Trim68Q8K243 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.81■□□□□ 0.28
Trim68Q8K243 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.81■□□□□ 0.28
Trim68Q8K243 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim68Q8K243 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Trim68Q8K243 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim68Q8K243 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.8■□□□□ 0.28
Trim68Q8K243 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.8■□□□□ 0.28
Trim68Q8K243 Gm5682-201ENSMUST00000173402 505 ntBASIC16.8■□□□□ 0.28
Trim68Q8K243 Gm5186-201ENSMUST00000218781 920 ntBASIC16.8■□□□□ 0.28
Trim68Q8K243 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim68Q8K243 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim68Q8K243 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.79■□□□□ 0.28
Trim68Q8K243 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim68Q8K243 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim68Q8K243 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms