Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.29■□□□□ 0.04
Vps50Q8CI71 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.29■□□□□ 0.04
Vps50Q8CI71 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps50Q8CI71 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Vps50Q8CI71 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vps50Q8CI71 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Gm44430-201ENSMUST00000203376 995 ntBASIC15.28■□□□□ 0.04
Vps50Q8CI71 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps50Q8CI71 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps50Q8CI71 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps50Q8CI71 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Gm15372-201ENSMUST00000120729 834 ntBASIC15.27■□□□□ 0.04
Vps50Q8CI71 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Vps50Q8CI71 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.27■□□□□ 0.04
Vps50Q8CI71 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.27■□□□□ 0.04
Vps50Q8CI71 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps50Q8CI71 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps50Q8CI71 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps50Q8CI71 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps50Q8CI71 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps50Q8CI71 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.27■□□□□ 0.03
Vps50Q8CI71 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms