Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Gm5177-201ENSMUST00000183092 997 ntBASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Gm17968-201ENSMUST00000194902 784 ntBASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Gm7556-201ENSMUST00000201178 1084 ntBASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rab11fip3Q8CHD8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Gm12008-201ENSMUST00000117791 755 ntBASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Gm2272-201ENSMUST00000194903 582 ntBASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rab11fip3Q8CHD8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Grk6-207ENSMUST00000225925 2769 ntBASIC20.02■□□□□ 0.8
Rab11fip3Q8CHD8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab11fip3Q8CHD8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab11fip3Q8CHD8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab11fip3Q8CHD8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab11fip3Q8CHD8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab11fip3Q8CHD8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.02■□□□□ 0.79
Rab11fip3Q8CHD8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.02■□□□□ 0.79
Rab11fip3Q8CHD8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab11fip3Q8CHD8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Thap2-203ENSMUST00000218989 527 ntBASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.01■□□□□ 0.79
Rab11fip3Q8CHD8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms