Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist3h2bbQ8CGP0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist3h2bbQ8CGP0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist3h2bbQ8CGP0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist3h2bbQ8CGP0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist3h2bbQ8CGP0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist3h2bbQ8CGP0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist3h2bbQ8CGP0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist3h2bbQ8CGP0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist3h2bbQ8CGP0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist3h2bbQ8CGP0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Gm13146-201ENSMUST00000118508 780 ntBASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Gm11643-201ENSMUST00000119578 864 ntBASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.8□□□□□ -0.52
Hist3h2bbQ8CGP0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hist3h2bbQ8CGP0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms