Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc46a2Q8CA03 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc46a2Q8CA03 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc46a2Q8CA03 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc46a2Q8CA03 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc46a2Q8CA03 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc46a2Q8CA03 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc46a2Q8CA03 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Slc46a2Q8CA03 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc46a2Q8CA03 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Gm37722-201ENSMUST00000193757 208 ntBASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slc46a2Q8CA03 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc46a2Q8CA03 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Gm13436-201ENSMUST00000120418 567 ntBASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Gm12134-201ENSMUST00000122109 520 ntBASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc46a2Q8CA03 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc46a2Q8CA03 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms