Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Alx1Q8C8B0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Alx1Q8C8B0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Alx1Q8C8B0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Alx1Q8C8B0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Alx1Q8C8B0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Alx1Q8C8B0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Asic1-205ENSMUST00000228185 1818 ntBASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Gm9727-201ENSMUST00000161387 555 ntBASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx1Q8C8B0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx1Q8C8B0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx1Q8C8B0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Gm13597-201ENSMUST00000121239 375 ntBASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Gm18246-201ENSMUST00000221023 728 ntBASIC18.04■□□□□ 0.48
Alx1Q8C8B0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Alx1Q8C8B0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx1Q8C8B0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx1Q8C8B0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx1Q8C8B0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.03■□□□□ 0.48
Alx1Q8C8B0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Alx1Q8C8B0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx1Q8C8B0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx1Q8C8B0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx1Q8C8B0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx1Q8C8B0 Gm11779-201ENSMUST00000118541 368 ntBASIC18.03■□□□□ 0.48
Alx1Q8C8B0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Alx1Q8C8B0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms