Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm10355-201ENSMUST00000097146 517 ntBASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Gm43347-201ENSMUST00000200226 580 ntBASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Gm6296-201ENSMUST00000222599 943 ntBASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim9Q8C7M3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim9Q8C7M3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Gm24589-201ENSMUST00000116692 94 ntBASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Gm13418-201ENSMUST00000119097 944 ntBASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Gm17971-201ENSMUST00000190239 806 ntBASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim9Q8C7M3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms