Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Gm9682-201ENSMUST00000197505 556 ntBASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp44Q8C2S0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.12■□□□□ 0.49
Usp44Q8C2S0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Gm13036-201ENSMUST00000117799 748 ntBASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Gm12350-201ENSMUST00000121208 462 ntBASIC18.11■□□□□ 0.49
Usp44Q8C2S0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Mir5131-201ENSMUST00000175426 93 ntBASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp44Q8C2S0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp44Q8C2S0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Gm18195-201ENSMUST00000207604 706 ntBASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Gm45167-201ENSMUST00000208007 322 ntBASIC18.1■□□□□ 0.49
Usp44Q8C2S0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms