Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Gm22189-201ENSMUST00000103822 86 ntBASIC20.66■□□□□ 0.9
Cps1Q8C196 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.65■□□□□ 0.9
Cps1Q8C196 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cps1Q8C196 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC20.65■□□□□ 0.9
Cps1Q8C196 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Gm27838-201ENSMUST00000184829 128 ntBASIC20.65■□□□□ 0.9
Cps1Q8C196 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Gm43703-201ENSMUST00000200523 763 ntBASIC20.65■□□□□ 0.9
Cps1Q8C196 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC20.65■□□□□ 0.9
Cps1Q8C196 AC158529.1-201ENSMUST00000223618 239 ntBASIC20.65■□□□□ 0.9
Cps1Q8C196 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cps1Q8C196 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC20.65■□□□□ 0.9
Cps1Q8C196 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cps1Q8C196 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cps1Q8C196 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cps1Q8C196 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cps1Q8C196 Gm24543-201ENSMUST00000103867 82 ntBASIC20.64■□□□□ 0.9
Cps1Q8C196 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
Cps1Q8C196 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cps1Q8C196 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cps1Q8C196 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cps1Q8C196 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC20.64■□□□□ 0.9
Cps1Q8C196 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC20.64■□□□□ 0.9
Cps1Q8C196 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
Cps1Q8C196 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cps1Q8C196 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
Cps1Q8C196 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cps1Q8C196 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cps1Q8C196 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cps1Q8C196 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cps1Q8C196 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cps1Q8C196 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cps1Q8C196 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cps1Q8C196 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 Gm12490-201ENSMUST00000120255 560 ntBASIC20.63■□□□□ 0.89
Cps1Q8C196 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC20.63■□□□□ 0.89
Cps1Q8C196 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cps1Q8C196 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cps1Q8C196 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cps1Q8C196 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC20.63■□□□□ 0.89
Cps1Q8C196 Syt7-205ENSMUST00000224135 1557 ntBASIC20.63■□□□□ 0.89
Cps1Q8C196 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cps1Q8C196 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cps1Q8C196 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cps1Q8C196 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cps1Q8C196 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cps1Q8C196 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Cps1Q8C196 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC20.63■□□□□ 0.89
Cps1Q8C196 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cps1Q8C196 AC135669.1-201ENSMUST00000213585 412 ntBASIC20.63■□□□□ 0.89
Cps1Q8C196 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cps1Q8C196 Asic1-205ENSMUST00000228185 1818 ntBASIC20.62■□□□□ 0.89
Cps1Q8C196 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cps1Q8C196 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cps1Q8C196 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cps1Q8C196 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cps1Q8C196 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.62■□□□□ 0.89
Cps1Q8C196 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cps1Q8C196 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cps1Q8C196 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cps1Q8C196 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cps1Q8C196 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cps1Q8C196 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cps1Q8C196 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.62■□□□□ 0.89
Cps1Q8C196 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cps1Q8C196 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.61■□□□□ 0.89
Cps1Q8C196 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cps1Q8C196 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms