Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Gm34391-201ENSMUST00000203706 907 ntBASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3rf3Q8C120 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Gm12497-201ENSMUST00000138778 237 ntBASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3rf3Q8C120 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf3Q8C120 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms