Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ppp4r4Q8C0Y0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Mir6404-201ENSMUST00000183699 94 ntBASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.7■□□□□ 0.1
Ppp4r4Q8C0Y0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Gm25406-201ENSMUST00000157599 105 ntBASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Gm27459-201ENSMUST00000184860 107 ntBASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Gm5864-201ENSMUST00000202263 970 ntBASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Birc2-201ENSMUST00000054878 378 ntBASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ppp4r4Q8C0Y0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ppp4r4Q8C0Y0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.67■□□□□ 0.1
Ppp4r4Q8C0Y0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms