Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.71■□□□□ 0.11
Sh3rf2Q8BZT2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Sh3rf2Q8BZT2 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Gm18246-201ENSMUST00000221023 728 ntBASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf2Q8BZT2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Gm8318-201ENSMUST00000182954 872 ntBASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.69■□□□□ 0.1
Sh3rf2Q8BZT2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Gm26308-201ENSMUST00000157768 69 ntBASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.68■□□□□ 0.1
Sh3rf2Q8BZT2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms