Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf7Q8BTV2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf7Q8BTV2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf7Q8BTV2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Gm10013-201ENSMUST00000106074 672 ntBASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Gm6659-201ENSMUST00000174752 547 ntBASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cpsf7Q8BTV2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.56■□□□□ 0.08
Cpsf7Q8BTV2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Gm22697-201ENSMUST00000175194 63 ntBASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Gm18101-201ENSMUST00000215769 548 ntBASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf7Q8BTV2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms