Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Gm7461-201ENSMUST00000058918 827 ntBASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp1r3eQ8BRJ4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp1r3eQ8BRJ4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Gm11355-201ENSMUST00000121120 306 ntBASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Gm27389-201ENSMUST00000183622 195 ntBASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Ppp1r3eQ8BRJ4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp1r3eQ8BRJ4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ppp1r3eQ8BRJ4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
Ppp1r3eQ8BRJ4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ppp1r3eQ8BRJ4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Ppp1r3eQ8BRJ4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ppp1r3eQ8BRJ4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms