Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smg1Q8BKX6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smg1Q8BKX6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smg1Q8BKX6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smg1Q8BKX6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smg1Q8BKX6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Gm12859-201ENSMUST00000117834 427 ntBASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smg1Q8BKX6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Gm22189-201ENSMUST00000103822 86 ntBASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smg1Q8BKX6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smg1Q8BKX6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13□□□□□ -0.33
Smg1Q8BKX6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13□□□□□ -0.33
Smg1Q8BKX6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 AC107711.5-202ENSMUST00000226429 702 ntBASIC13□□□□□ -0.33
Smg1Q8BKX6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smg1Q8BKX6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13□□□□□ -0.33
Smg1Q8BKX6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smg1Q8BKX6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smg1Q8BKX6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Gm9257-201ENSMUST00000221254 232 ntBASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Gm8515-201ENSMUST00000194852 576 ntBASIC12.99□□□□□ -0.33
Smg1Q8BKX6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms