Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Usp1Q8BJQ2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp1Q8BJQ2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp1Q8BJQ2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Chchd1-203ENSMUST00000224633 557 ntBASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp1Q8BJQ2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms