Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Chmp2bQ8BJF9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Gm6345-202ENSMUST00000180900 204 ntBASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.91■□□□□ 0.14
Chmp2bQ8BJF9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp2bQ8BJF9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp2bQ8BJF9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp2bQ8BJF9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp2bQ8BJF9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Chmp2bQ8BJF9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chmp2bQ8BJF9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp2bQ8BJF9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.89■□□□□ 0.13
Chmp2bQ8BJF9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp2bQ8BJF9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.89■□□□□ 0.13
Chmp2bQ8BJF9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms