Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Depdc1bQ8BH88 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Depdc1bQ8BH88 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Gm25406-201ENSMUST00000157599 105 ntBASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Depdc1bQ8BH88 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms