Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Gm1401-201ENSMUST00000122048 772 ntBASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Gm37153-201ENSMUST00000193637 231 ntBASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Gm15590-201ENSMUST00000078419 552 ntBASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim23Q8BGX0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Gm18489-201ENSMUST00000172565 551 ntBASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Gm27628-201ENSMUST00000184911 107 ntBASIC14.97□□□□□ -0.01
Trim23Q8BGX0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.97□□□□□ -0.01
Trim23Q8BGX0 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim23Q8BGX0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim23Q8BGX0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trim23Q8BGX0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim23Q8BGX0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trim23Q8BGX0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim23Q8BGX0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim23Q8BGX0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms