Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Gm7653-201ENSMUST00000214567 508 ntBASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trnp1Q80ZI1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Gm15487-201ENSMUST00000122373 465 ntBASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Gm16215-201ENSMUST00000161990 637 ntBASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Syt7-205ENSMUST00000224135 1557 ntBASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trnp1Q80ZI1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Gm15483-201ENSMUST00000120338 456 ntBASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Gm27680-201ENSMUST00000184192 160 ntBASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Gm44855-201ENSMUST00000205725 362 ntBASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trnp1Q80ZI1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.38■□□□□ 0.37
Trnp1Q80ZI1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms