Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Gm9682-201ENSMUST00000197505 556 ntBASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Gm45167-201ENSMUST00000208007 322 ntBASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Gm5364-201ENSMUST00000216789 889 ntBASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Psmb5-202ENSMUST00000227257 622 ntBASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lrrtm4Q80XG9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Lrrtm4Q80XG9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Lrrtm4Q80XG9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrtm4Q80XG9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrtm4Q80XG9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.08■□□□□ 0.01
Lrrtm4Q80XG9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrtm4Q80XG9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Gm14140-201ENSMUST00000119999 995 ntBASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms