Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Srrm3Q80WV7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Gm7063-201ENSMUST00000186840 981 ntBASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Srrm3Q80WV7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Gm13474-201ENSMUST00000122466 815 ntBASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Gm7791-201ENSMUST00000219066 539 ntBASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms