Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Gm10499-201ENSMUST00000174094 934 ntBASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Gm45747-201ENSMUST00000212203 999 ntBASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.15■□□□□ 0.66
Ddx58Q6Q899 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.15■□□□□ 0.66
Ddx58Q6Q899 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx58Q6Q899 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Ddx58Q6Q899 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx58Q6Q899 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Gm27301-201ENSMUST00000184012 127 ntBASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx58Q6Q899 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Gm12008-201ENSMUST00000117791 755 ntBASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Thap2-203ENSMUST00000218989 527 ntBASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx58Q6Q899 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms