Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Gm27731-201ENSMUST00000185192 107 ntBASIC13.04□□□□□ -0.32
Rif1Q6PR54 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Gm14042-201ENSMUST00000120139 833 ntBASIC13.04□□□□□ -0.32
Rif1Q6PR54 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Rif1Q6PR54 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Gm27533-201ENSMUST00000183800 152 ntBASIC13.04□□□□□ -0.32
Rif1Q6PR54 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Gm43179-201ENSMUST00000198797 275 ntBASIC13.04□□□□□ -0.32
Rif1Q6PR54 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.04□□□□□ -0.32
Rif1Q6PR54 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rif1Q6PR54 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.03□□□□□ -0.32
Rif1Q6PR54 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm22902-201ENSMUST00000158488 302 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm13015-201ENSMUST00000118674 204 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm4518-201ENSMUST00000182638 718 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Rif1Q6PR54 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.03□□□□□ -0.32
Rif1Q6PR54 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rif1Q6PR54 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rif1Q6PR54 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms