Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Gm13223-201ENSMUST00000118609 747 ntBASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Gm20949-201ENSMUST00000206478 952 ntBASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nup98Q6PFD9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nup98Q6PFD9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.1■□□□□ 0.49
Nup98Q6PFD9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.09■□□□□ 0.49
Nup98Q6PFD9 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms