Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShbQ6PD21 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShbQ6PD21 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ShbQ6PD21 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.64■□□□□ 0.25
ShbQ6PD21 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShbQ6PD21 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
ShbQ6PD21 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.64■□□□□ 0.25
ShbQ6PD21 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ShbQ6PD21 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ShbQ6PD21 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ShbQ6PD21 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShbQ6PD21 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShbQ6PD21 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ShbQ6PD21 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShbQ6PD21 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ShbQ6PD21 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.63■□□□□ 0.25
ShbQ6PD21 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.63■□□□□ 0.25
ShbQ6PD21 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShbQ6PD21 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ShbQ6PD21 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ShbQ6PD21 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ShbQ6PD21 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShbQ6PD21 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShbQ6PD21 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ShbQ6PD21 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ShbQ6PD21 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
ShbQ6PD21 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.62■□□□□ 0.25
ShbQ6PD21 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.62■□□□□ 0.25
ShbQ6PD21 Gm4875-201ENSMUST00000118257 786 ntBASIC16.62■□□□□ 0.25
ShbQ6PD21 Gm15653-201ENSMUST00000119247 907 ntBASIC16.62■□□□□ 0.25
ShbQ6PD21 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.62■□□□□ 0.25
ShbQ6PD21 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Gm6266-201ENSMUST00000203844 806 ntBASIC16.62■□□□□ 0.25
ShbQ6PD21 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.62■□□□□ 0.25
ShbQ6PD21 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.62■□□□□ 0.25
ShbQ6PD21 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShbQ6PD21 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.62■□□□□ 0.25
ShbQ6PD21 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShbQ6PD21 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ShbQ6PD21 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ShbQ6PD21 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShbQ6PD21 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.61■□□□□ 0.25
ShbQ6PD21 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ShbQ6PD21 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.61■□□□□ 0.25
ShbQ6PD21 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ShbQ6PD21 Gm43703-201ENSMUST00000200523 763 ntBASIC16.61■□□□□ 0.25
ShbQ6PD21 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShbQ6PD21 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.61■□□□□ 0.25
ShbQ6PD21 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShbQ6PD21 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.61■□□□□ 0.25
ShbQ6PD21 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShbQ6PD21 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShbQ6PD21 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.61■□□□□ 0.25
ShbQ6PD21 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShbQ6PD21 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShbQ6PD21 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.61■□□□□ 0.25
ShbQ6PD21 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.61■□□□□ 0.25
ShbQ6PD21 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.6■□□□□ 0.25
ShbQ6PD21 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.6■□□□□ 0.25
ShbQ6PD21 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.6■□□□□ 0.25
ShbQ6PD21 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Gm20445-201ENSMUST00000061905 565 ntBASIC16.6■□□□□ 0.25
ShbQ6PD21 Gm15823-201ENSMUST00000064305 670 ntBASIC16.6■□□□□ 0.25
ShbQ6PD21 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShbQ6PD21 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms