Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Gm10013-201ENSMUST00000106074 672 ntBASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Gm6257-201ENSMUST00000163864 910 ntBASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd3Q6P9Z1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd3Q6P9Z1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd3Q6P9Z1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd3Q6P9Z1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd3Q6P9Z1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd3Q6P9Z1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd3Q6P9Z1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd3Q6P9Z1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd3Q6P9Z1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Smarcd3Q6P9Z1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Gm9013-201ENSMUST00000132939 882 ntBASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Gm6623-201ENSMUST00000173570 544 ntBASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Gm10231-201ENSMUST00000181584 441 ntBASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Gm10175-202ENSMUST00000208752 441 ntBASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.27□□□□□ -0.13
Smarcd3Q6P9Z1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd3Q6P9Z1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms