Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp49Q6P9L4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp49Q6P9L4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp49Q6P9L4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp49Q6P9L4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp49Q6P9L4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp49Q6P9L4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Gm19164-201ENSMUST00000210667 640 ntBASIC17.39■□□□□ 0.37
Usp49Q6P9L4 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp49Q6P9L4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Usp49Q6P9L4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Gm11780-201ENSMUST00000136880 516 ntBASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp49Q6P9L4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp49Q6P9L4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.35■□□□□ 0.37
Usp49Q6P9L4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp49Q6P9L4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp49Q6P9L4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp49Q6P9L4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp49Q6P9L4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp49Q6P9L4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms