Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Gm10819-201ENSMUST00000099988 561 ntBASIC17.42■□□□□ 0.38
Abcf1Q6P542 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.42■□□□□ 0.38
Abcf1Q6P542 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Gm27742-201ENSMUST00000184667 60 ntBASIC17.41■□□□□ 0.38
Abcf1Q6P542 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.41■□□□□ 0.38
Abcf1Q6P542 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Abcf1Q6P542 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Abcf1Q6P542 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.4■□□□□ 0.38
Abcf1Q6P542 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.4■□□□□ 0.38
Abcf1Q6P542 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf1Q6P542 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Abcf1Q6P542 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Abcf1Q6P542 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Abcf1Q6P542 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Abcf1Q6P542 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Ank2-226ENSMUST00000189368 339 ntBASIC17.39■□□□□ 0.37
Abcf1Q6P542 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.39■□□□□ 0.37
Abcf1Q6P542 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.39■□□□□ 0.37
Abcf1Q6P542 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcf1Q6P542 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms