Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six2Q62232 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six2Q62232 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six2Q62232 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Six2Q62232 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six2Q62232 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.54■□□□□ 0.24
Six2Q62232 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.54■□□□□ 0.24
Six2Q62232 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.54■□□□□ 0.24
Six2Q62232 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.54■□□□□ 0.24
Six2Q62232 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.54■□□□□ 0.24
Six2Q62232 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six2Q62232 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.54■□□□□ 0.24
Six2Q62232 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six2Q62232 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.54■□□□□ 0.24
Six2Q62232 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six2Q62232 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six2Q62232 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six2Q62232 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six2Q62232 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six2Q62232 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Six2Q62232 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Six2Q62232 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.53■□□□□ 0.24
Six2Q62232 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.53■□□□□ 0.24
Six2Q62232 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Six2Q62232 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.53■□□□□ 0.24
Six2Q62232 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.53■□□□□ 0.24
Six2Q62232 Gm6296-201ENSMUST00000222599 943 ntBASIC16.53■□□□□ 0.24
Six2Q62232 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Six2Q62232 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Six2Q62232 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six2Q62232 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six2Q62232 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six2Q62232 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six2Q62232 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six2Q62232 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six2Q62232 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.52■□□□□ 0.24
Six2Q62232 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six2Q62232 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.52■□□□□ 0.24
Six2Q62232 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.52■□□□□ 0.24
Six2Q62232 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six2Q62232 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six2Q62232 Gm9103-201ENSMUST00000119371 405 ntBASIC16.52■□□□□ 0.24
Six2Q62232 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.52■□□□□ 0.24
Six2Q62232 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six2Q62232 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.52■□□□□ 0.23
Six2Q62232 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six2Q62232 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
Six2Q62232 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six2Q62232 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Six2Q62232 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Six2Q62232 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Six2Q62232 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Six2Q62232 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six2Q62232 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Six2Q62232 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six2Q62232 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six2Q62232 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six2Q62232 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Six2Q62232 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Six2Q62232 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.51■□□□□ 0.23
Six2Q62232 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six2Q62232 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.51■□□□□ 0.23
Six2Q62232 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.51■□□□□ 0.23
Six2Q62232 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.51■□□□□ 0.23
Six2Q62232 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.51■□□□□ 0.23
Six2Q62232 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Six2Q62232 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Six2Q62232 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six2Q62232 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six2Q62232 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six2Q62232 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six2Q62232 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Six2Q62232 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six2Q62232 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six2Q62232 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Six2Q62232 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms