Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SspnQ62147 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SspnQ62147 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SspnQ62147 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SspnQ62147 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SspnQ62147 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SspnQ62147 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SspnQ62147 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SspnQ62147 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SspnQ62147 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SspnQ62147 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
SspnQ62147 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SspnQ62147 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
SspnQ62147 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SspnQ62147 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Gm6659-201ENSMUST00000174752 547 ntBASIC13.01□□□□□ -0.33
SspnQ62147 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.01□□□□□ -0.33
SspnQ62147 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SspnQ62147 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SspnQ62147 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SspnQ62147 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SspnQ62147 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13□□□□□ -0.33
SspnQ62147 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13□□□□□ -0.33
SspnQ62147 Gm44616-201ENSMUST00000206417 1732 ntBASIC13□□□□□ -0.33
SspnQ62147 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
SspnQ62147 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13□□□□□ -0.33
SspnQ62147 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13□□□□□ -0.33
SspnQ62147 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SspnQ62147 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SspnQ62147 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13□□□□□ -0.33
SspnQ62147 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SspnQ62147 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SspnQ62147 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SspnQ62147 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SspnQ62147 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13□□□□□ -0.33
SspnQ62147 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SspnQ62147 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SspnQ62147 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Mir6404-201ENSMUST00000183699 94 ntBASIC12.99□□□□□ -0.33
SspnQ62147 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.99□□□□□ -0.33
SspnQ62147 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SspnQ62147 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
SspnQ62147 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SspnQ62147 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SspnQ62147 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
SspnQ62147 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SspnQ62147 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SspnQ62147 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SspnQ62147 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.98□□□□□ -0.33
SspnQ62147 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms