Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.29■□□□□ 0.52
Ctr9Q62018 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Ctr9Q62018 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ctr9Q62018 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctr9Q62018 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctr9Q62018 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Ctr9Q62018 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.28■□□□□ 0.52
Ctr9Q62018 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctr9Q62018 Gm9682-201ENSMUST00000197505 556 ntBASIC18.28■□□□□ 0.52
Ctr9Q62018 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.28■□□□□ 0.52
Ctr9Q62018 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctr9Q62018 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ctr9Q62018 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.28■□□□□ 0.52
Ctr9Q62018 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctr9Q62018 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ctr9Q62018 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.28■□□□□ 0.52
Ctr9Q62018 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ctr9Q62018 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ctr9Q62018 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctr9Q62018 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctr9Q62018 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctr9Q62018 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctr9Q62018 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctr9Q62018 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.27■□□□□ 0.52
Ctr9Q62018 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctr9Q62018 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctr9Q62018 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ctr9Q62018 Gm18489-201ENSMUST00000172565 551 ntBASIC18.27■□□□□ 0.52
Ctr9Q62018 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.27■□□□□ 0.52
Ctr9Q62018 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.27■□□□□ 0.52
Ctr9Q62018 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.27■□□□□ 0.52
Ctr9Q62018 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.27■□□□□ 0.52
Ctr9Q62018 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.27■□□□□ 0.52
Ctr9Q62018 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctr9Q62018 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
Ctr9Q62018 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ctr9Q62018 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ctr9Q62018 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.27■□□□□ 0.51
Ctr9Q62018 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ctr9Q62018 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ctr9Q62018 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ctr9Q62018 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ctr9Q62018 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ctr9Q62018 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Ctr9Q62018 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.26■□□□□ 0.51
Ctr9Q62018 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Ctr9Q62018 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.26■□□□□ 0.51
Ctr9Q62018 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ctr9Q62018 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 Gm9727-201ENSMUST00000161387 555 ntBASIC18.26■□□□□ 0.51
Ctr9Q62018 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.26■□□□□ 0.51
Ctr9Q62018 Gm8000-201ENSMUST00000188378 592 ntBASIC18.26■□□□□ 0.51
Ctr9Q62018 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ctr9Q62018 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ctr9Q62018 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ctr9Q62018 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ctr9Q62018 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ctr9Q62018 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.25■□□□□ 0.51
Ctr9Q62018 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ctr9Q62018 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.25■□□□□ 0.51
Ctr9Q62018 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ctr9Q62018 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctr9Q62018 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctr9Q62018 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Ctr9Q62018 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctr9Q62018 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctr9Q62018 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ctr9Q62018 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctr9Q62018 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ctr9Q62018 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ctr9Q62018 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ctr9Q62018 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Ctr9Q62018 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.25■□□□□ 0.51
Ctr9Q62018 Gm12260-201ENSMUST00000122447 411 ntBASIC18.25■□□□□ 0.51
Ctr9Q62018 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Ctr9Q62018 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctr9Q62018 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.25■□□□□ 0.51
Ctr9Q62018 Gm27300-201ENSMUST00000184085 97 ntBASIC18.25■□□□□ 0.51
Ctr9Q62018 Gm27335-201ENSMUST00000184758 97 ntBASIC18.25■□□□□ 0.51
Ctr9Q62018 Gm5264-201ENSMUST00000190584 848 ntBASIC18.25■□□□□ 0.51
Ctr9Q62018 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.25■□□□□ 0.51
Ctr9Q62018 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ctr9Q62018 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.25■□□□□ 0.51
Ctr9Q62018 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms