Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Notch3Q61982 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.95□□□□□ -0.5
Notch3Q61982 Gm8097-201ENSMUST00000117903 829 ntBASIC11.95□□□□□ -0.5
Notch3Q61982 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Notch3Q61982 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Notch3Q61982 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Notch3Q61982 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Notch3Q61982 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Notch3Q61982 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Notch3Q61982 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Notch3Q61982 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Notch3Q61982 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.95□□□□□ -0.5
Notch3Q61982 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.94□□□□□ -0.5
Notch3Q61982 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.94□□□□□ -0.5
Notch3Q61982 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.94□□□□□ -0.5
Notch3Q61982 Gm27646-201ENSMUST00000183989 110 ntBASIC11.94□□□□□ -0.5
Notch3Q61982 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.94□□□□□ -0.5
Notch3Q61982 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Notch3Q61982 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.94□□□□□ -0.5
Notch3Q61982 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.94□□□□□ -0.5
Notch3Q61982 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.94□□□□□ -0.5
Notch3Q61982 Gm8655-201ENSMUST00000221159 852 ntBASIC11.94□□□□□ -0.5
Notch3Q61982 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Notch3Q61982 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Notch3Q61982 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Notch3Q61982 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Notch3Q61982 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Gm26308-201ENSMUST00000157768 69 ntBASIC11.93□□□□□ -0.5
Notch3Q61982 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.93□□□□□ -0.5
Notch3Q61982 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Notch3Q61982 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.93□□□□□ -0.5
Notch3Q61982 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Notch3Q61982 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.93□□□□□ -0.5
Notch3Q61982 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.93□□□□□ -0.5
Notch3Q61982 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.93□□□□□ -0.5
Notch3Q61982 Gm27397-201ENSMUST00000184997 107 ntBASIC11.93□□□□□ -0.5
Notch3Q61982 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.93□□□□□ -0.5
Notch3Q61982 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Notch3Q61982 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Notch3Q61982 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Notch3Q61982 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.92□□□□□ -0.5
Notch3Q61982 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Notch3Q61982 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.92□□□□□ -0.5
Notch3Q61982 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.92□□□□□ -0.5
Notch3Q61982 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Notch3Q61982 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms