Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.43□□□□□ -0.58
Foxc1Q61572 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.43□□□□□ -0.58
Foxc1Q61572 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.43□□□□□ -0.58
Foxc1Q61572 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.43□□□□□ -0.58
Foxc1Q61572 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Foxc1Q61572 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Foxc1Q61572 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Foxc1Q61572 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Foxc1Q61572 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Foxc1Q61572 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.42□□□□□ -0.58
Foxc1Q61572 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.42□□□□□ -0.58
Foxc1Q61572 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Foxc1Q61572 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC11.42□□□□□ -0.58
Foxc1Q61572 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.42□□□□□ -0.58
Foxc1Q61572 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Foxc1Q61572 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
Foxc1Q61572 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Foxc1Q61572 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.42□□□□□ -0.58
Foxc1Q61572 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
Foxc1Q61572 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Gm37720-201ENSMUST00000195497 1241 ntBASIC11.42□□□□□ -0.58
Foxc1Q61572 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.42□□□□□ -0.58
Foxc1Q61572 Gm45574-201ENSMUST00000210921 331 ntBASIC11.42□□□□□ -0.58
Foxc1Q61572 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.42□□□□□ -0.58
Foxc1Q61572 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.42□□□□□ -0.58
Foxc1Q61572 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Foxc1Q61572 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Foxc1Q61572 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Foxc1Q61572 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Foxc1Q61572 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Foxc1Q61572 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Foxc1Q61572 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Foxc1Q61572 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.41□□□□□ -0.58
Foxc1Q61572 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.41□□□□□ -0.58
Foxc1Q61572 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.41□□□□□ -0.58
Foxc1Q61572 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.41□□□□□ -0.58
Foxc1Q61572 Mir6404-201ENSMUST00000183699 94 ntBASIC11.41□□□□□ -0.58
Foxc1Q61572 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC11.41□□□□□ -0.58
Foxc1Q61572 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.41□□□□□ -0.58
Foxc1Q61572 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Foxc1Q61572 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Foxc1Q61572 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms